Algoritmi | User | Armando José Formoso de Pinho

Armando José Formoso de Pinho

Armando José Formoso de Pinho

At LASI

Member of the IEETA R&D Unit

Academic Degree

Current Position

at

Personal Webpage

Personal Email

Orcid

0000-0002-9164-0016

Researcher ID

FCT Public Key

Ciência ID

6012-FBC9-2C32

Google Scholar

About Me



A Machine Learning Method for Authentication of Human Ancient Mitochondrial DNA

2026 | book-chapter

ECOmpress: A Web Tool for Boosting Energy Efficiency Through Data Compression

2026 | book-chapter

GBRF: A Novel Framework for Encoding User-Preferences in Imbalanced Data Distributions via Genetic Optimization

2026 | book-chapter

Informed Decision Making Strategy for Resampling in Pain Assessment

2026 | book-chapter

Towards a New Categorization of Models for Multivariate Time Series Anomaly Detection

2026 | book-chapter

A Survey on the Development of Human-Centered Artificial Agents for Fighting Games

IEEE Transactions on Games

2025 | journal-article

JARVIS3: an efficient encoder for genomic data

Bioinformatics

2024 | journal-article

AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

GigaScience

2024 | journal-article

Concentration of inverted repeats along human DNA

Journal of Integrative Bioinformatics

2023 | journal-article

AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data

2023 | preprint

Genomic Regions with Atypical Concentration of Inverted Repeats

2023 | book-chapter

Pattern Recognition and Image Analysis

Springer International Publishing

2022 | edited-book

On the Impact of the Data Acquisition Protocol on ECG Biometric Identification

Sensors

2021 | journal-article

AC2: An Efficient Protein Sequence Compression Tool Using Artificial Neural Networks and Cache-Hash Models

Entropy

2021 | journal-article

Automatic analysis of artistic paintings using information-based measures

2021 | website

Statistical n-Best AFD-Based Sparse Representation for ECG Biometric Identification

IEEE Transactions on Instrumentation and Measurement

2021 | journal-article

Assessing Job Market Dynamics Using ELK Stack

19th International Conference on WWW/Internet

2020 | conference-paper

Multimodal Emotion Evaluation: A Physiological Model for Cost-Effective Emotion Classification

Sensors

2020 | journal-article

Competitive Segmentation Performance on Near-Lossless and Lossy Compressed Remote Sensing Images

IEEE Geoscience and Remote Sensing Letters

2020 | journal-article

An Information-Theoretical Method for Emotion Classification

IFMBE Proceedings

2020 | conference-paper

Detection and Characterization of Local Inverted Repeats Regularities

Advances in Intelligent Systems and Computing

2020 | book

GeCo2: An Optimized Tool for Lossless Compression and Analysis of DNA Sequences

Advances in Intelligent Systems and Computing

2020 | book

Visualization of Similar Primer and Adapter Sequences in Assembled Archaeal Genomes

Advances in Intelligent Systems and Computing

2020 | book

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models

Entropy

2019 | journal-article

A DNA sequence corpus for compression benchmark

Advances in Intelligent Systems and Computing

2019 | book

A probabilistic method to find and visualize distinct regions in protein sequences

European Signal Processing Conference

2019 | conference-paper

AC: A Compression Tool for Amino Acid Sequences

Interdisciplinary Sciences: Computational Life Sciences

2019 | journal-article

An Analysis of Symmetric Words in Human DNA: Adjacent vs Non-adjacent Word Distances

Advances in Intelligent Systems and Computing

2019 | book

Compression of amino acid sequences

Advances in Intelligent Systems and Computing

2019 | book

Compression-Based Classification of ECG Using First-Order Derivatives

2019 | book-chapter

Cryfa: A secure encryption tool for genomic data

Bioinformatics

2019 | journal-article

Distribution of Distances Between Symmetric Words in the Human Genome: Analysis of Regular Peaks

Interdisciplinary Sciences: Computational Life Sciences

2019 | journal-article

NET-ASAR: A tool for DNA sequence search based on data compression

Advances in Intelligent Systems and Computing

2019 | book

Extended-alphabet finite-context models

Pattern Recognition Letters

2018 | journal-article

Metagenomic Composition Analysis of an Ancient Sequenced Polar Bear Jawbone from Svalbard

Genes

2018 | journal-article

FALCON-meta: a method to infer metagenomic composition of ancient DNA

2018 | other

An Application of Data Compression Models to Handwritten Digit Classification

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2018 | book

Biometric and emotion identification: An ECG compression based method

Frontiers in Psychology

2018 | journal-article

Comparing Reverse Complementary Genomic Words Based on Their Distance Distributions and Frequencies

Interdisciplinary Sciences: Computational Life Sciences

2018 | journal-article

Comparison of compression-based measures with application to the evolution of primate genomes

Entropy

2018 | journal-article

Metagenomic composition analysis of sedimentary ancient DNA from the Isle of Wight

European Signal Processing Conference

2018 | conference-paper

An approach to robot task learning and planning with loops

IEEE International Conference on Intelligent Robots and Systems

2017 | conference-paper

Cryfa: A tool to compact and encrypt FASTA files

Advances in Intelligent Systems and Computing

2017 | book

DNA word analysis based on the distribution of the distances between symmetric words

Scientific Reports

2017 | journal-article

Dissimilar symmetric word pairs in the human genome

Advances in Intelligent Systems and Computing

2017 | book

Impact of the acquisition time on ECG compression-based biometric identification systems

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

Learning and planning of robot tasks with loops

2017 IEEE International Conference on Autonomous Robot Systems and Competitions, ICARSC 2017

2017 | conference-paper

Learning robot tasks with loops from experiences to enhance robot adaptability

Pattern Recognition Letters

2017 | journal-article

On the approximation of the Kolmogorov complexity for DNA sequences

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

On the role of inverted repeats in DNA sequence similarity

Advances in Intelligent Systems and Computing

2017 | book

Substitutional tolerant markov models for relative compression of DNA sequences

Advances in Intelligent Systems and Computing

2017 | book

Visualization of distinct DNA regions of the modern human relatively to a neanderthal genome

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

A survey on data compression methods for biological sequences

Information (Switzerland)

2016 | journal-article

Analysis-driven lossy compression of DNA microarray images

IEEE Transactions on Medical Imaging

2016 | journal-article

Authorship Attribution Using Relative Compression

Data Compression Conference Proceedings

2016 | conference-paper

Detection of exceptional genomic words: a comparison between species

22nd International Conference on Computational Statistics, COMPSTAT 2016

2016 | conference-abstract

Efficient Compression of Genomic Sequences

Data Compression Conference Proceedings

2016 | conference-paper

Experience-Based Planning Domains: an Integrated Learning and Deliberation Approach for Intelligent Robots: Robot Task Learning from Human Instructions

Journal of Intelligent and Robotic Systems: Theory and Applications

2016 | journal-article

Experience-based robot task Learning and planning with goal inference

Proceedings International Conference on Automated Planning and Scheduling, ICAPS

2016 | conference-paper

Gathering and conceptualizing plan-based robot activity experiences

Advances in Intelligent Systems and Computing

2016 | book

Progressive lossy-to-lossless compression of DNA microarray images

IEEE Signal Processing Letters

2016 | journal-article

An alignment-free method to find and visualise rearrangements between pairs of DNA sequences

Scientific Reports

2015 | journal-article

ECG biometric identification: A compression based approach

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

2015 | conference-paper

Mafco: A compression tool for MAF files

PLoS ONE

2015 | journal-article

Planning with activity schemata: Closing the loop in experience-based planning

Proceedings - 2015 IEEE International Conference on Autonomous Robot Systems and Competitions, ICARSC 2015

2015 | conference-paper

Three minimal sequences found in Ebola virus genomes and absent from human DNA

Bioinformatics

2015 | journal-article

A conditional compression distance that unveils insights of the genomic evolution

Data Compression Conference Proceedings

2014 | conference-paper

A method to detect repeated unknown patterns in an image

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

A new compressor for measuring distances among images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

Compression of microarray images using a binary tree decomposition

European Signal Processing Conference

2014 | conference-paper

Compression-based normal similarity measures for DNA sequences

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2014 | conference-paper

Exploring deep Markov models in genomic data compression using sequence pre-analysis

European Signal Processing Conference

2014 | conference-paper

Information profiles for DNA pattern discovery

Data Compression Conference Proceedings

2014 | conference-paper

Mfcompress: A compression tool for fasta and multi-fasta data

Bioinformatics

2014 | journal-article

On entropy-based data mining

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

The natural scale of signals: Pulse duration and superoscillations

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2014 | conference-paper

XS: A FASTQ read simulator

BMC Research Notes

2014 | journal-article

A compression model for DNA multiple sequence alignment blocks

IEEE Transactions on Information Theory

2013 | journal-article

A genomic distance for assembly comparison based on compressed maximal exact matches

IEEE/ACM Transactions on Computational Biology and Bioinformatics

2013 | journal-article

An ontology-based multi-level robot architecture for learning from experiences

AAAI Spring Symposium - Technical Report

2013 | conference-paper

Bacterial DNA sequence compression models using artificial neural networks

Entropy

2013 | journal-article

Compressing resequencing data with GReEn

Methods in Molecular Biology

2013 | book

DNA sequences at a glance

PLoS ONE

2013 | journal-article

Inter-STOP symbol distances for the identification of coding regions.

Journal of integrative bioinformatics

2013 | journal-article

Segmentation of DNA into Coding and Noncoding Regions Based on Inter-STOP Symbols Distances

Advances in Intelligent Systems and Computing

2013 | book

The breakdown of the word symmetry in the human genome

Journal of Theoretical Biology

2013 | journal-article

The rank of random binary matrices and distributed storage applications

IEEE Communications Letters

2013 | journal-article

Compression of whole genome alignments using a mixture of finite-context models

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2012 | book

Computation of the normalized compression distance of DNA sequences using a mixture of finite-context models

BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms

2012 | conference-paper

Exon: A web-based software toolkit for DNA sequence analysis

Advances in Intelligent and Soft Computing

2012 | book

Finite-context models for image compression

Computational Vision and Medical Image Processing, Proceedings of VipIMAGE 2011 - 3rd ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing

2012 | conference-paper

GReEn: A tool for efficient compression of genome resequencing data

Nucleic Acids Research

2012 | journal-article

On the detection of unknown locally repeating patterns in images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2012 | book

A probabilistic image analysis problem and random linear equations

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

An efficient omnidirectional vision system for soccer robots: From calibration to object detection

Mechatronics

2011 | journal-article

Bacteria DNA sequence compression using a mixture of finite-context models

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

Complexity profiles of DNA sequences using finite-context models

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2011 | book

Compressing the human genome using exclusively Markov models

Advances in Intelligent and Soft Computing

2011 | book

DNA synthetic sequences generation using multiple competing Markov models

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

Distances between dinucleotides in the human genome

Advances in Intelligent and Soft Computing

2011 | book

Finding unknown repeated patterns in images

European Signal Processing Conference

2011 | conference-paper

Genome analysis with distance to the nearest dissimilar nucleotide

Journal of Theoretical Biology

2011 | journal-article

Image similarity using the normalized compression distance based on finite context models

Proceedings - International Conference on Image Processing, ICIP

2011 | conference-paper

Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions.

Journal of integrative bioinformatics

2011 | journal-article

Minimal absent words in four human genome assemblies

PLoS ONE

2011 | journal-article

Minimal absent words in prokaryotic and eukaryotic genomes

PLoS ONE

2011 | journal-article

On the representability of complete genomes by multiple competing finite-context (Markov) models

PLoS ONE

2011 | journal-article

Random block-angular matrices for distributed data storage

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2011 | conference-paper

Symbolic to numerical conversion of DNA sequences using finite-context models

European Signal Processing Conference

2011 | conference-paper

Exploring homology using the concept of three-state entropy vector

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2010 | book

Autonomous configuration of parameters in robotic digital cameras

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

DNA coding using finite-context models and arithmetic coding

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2009 | conference-paper

Genome analysis with inter-nucleotide distances

Bioinformatics

2009 | journal-article

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

Lossless compression of microarray images using image-dependent finite-context models

IEEE Transactions on Medical Imaging

2009 | journal-article

On finding minimal absent words

BMC Bioinformatics

2009 | journal-article

Progressive lossless compression of medical images

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2009 | conference-paper

Variable order finite-context models in DNA sequence coding

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

A bitplane based algorithm for lossless compression of DNA microarray images

European Signal Processing Conference

2008 | conference-paper

Inverted-repeats-aware finite-context models for DNA coding

European Signal Processing Conference

2008 | conference-paper

An omnidirectional vision system for soccer robots

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2007 | book

L-infinity progressive image compression

PCS 2007 - 26th Picture Coding Symposium

2007 | conference-paper

A bit-plane approach for lossless compression of color-quantized images

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2006 | conference-paper

A three-state model for DNA protein-coding regions

IEEE Transactions on Biomedical Engineering

2006 | journal-article

Enhancing the reactivity of the vision subsystem in autonomous mobile robots using real-time techniques

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2006 | book

Exploring three-base periodicity for DNA compression and modeling

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2006 | conference-paper

Lossless compression of microarray images

Proceedings - International Conference on Image Processing, ICIP

2006 | conference-paper

Lossy-to-lossless compression of images based on binary tree decomposition

Proceedings - International Conference on Image Processing, ICIP

2006 | conference-paper

On the relation between Memon's and the modified Zeng's palette reordering methods

Image and Vision Computing

2006 | journal-article

On the use of standards for microarray lossless image compression

IEEE Transactions on Biomedical Engineering

2006 | journal-article

A context adaptation model for the compression of images with a reduced number of colors

Proceedings - International Conference on Image Processing, ICIP

2005 | conference-paper

Lossless bit-plane compression of microarray images using 3D context models

Proceedings of the 5th IASTED International Conference on Visualization, Imaging, and Image Processing, VIIP 2005

2005 | conference-paper

A note on Zeng's technique for color reindexing of palette-based images

IEEE Signal Processing Letters

2004 | journal-article

A survey on palette reordering methods for improving the compression of color-indexed images

IEEE Transactions on Image Processing

2004 | journal-article

Evaluation of some reordering techniques for image VQ index compression

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2004 | book

Lossless compression of color-quantized images using block-based palette reordering

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2004 | book

Palette reordering under an exponential power distribution model of prediction residuals

Proceedings - International Conference on Image Processing, ICIP

2004 | conference-paper

Variable size block-based histogram packing for lossless coding of color-quantized images

Proceedings of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing

2004 | conference-paper

Block-based histogram packing of color-quantized images

Proceedings - IEEE International Conference on Multimedia and Expo

2003 | conference-paper

JPEG 2000 coding of color-quantized images

IEEE International Conference on Image Processing

2003 | conference-paper

On the efficiency of luminance-based palette reordering of color-quantized images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2003 | book

A comparison of methods for improving the lossless compression of images with sparse histograms

IEEE International Conference on Image Processing

2002 | conference-paper

An online preprocessing technique for improving the lossless compression of images with sparse histograms

IEEE Signal Processing Letters

2002 | journal-article

Histogram packing, total variation, and lossless image compression

European Signal Processing Conference

2002 | conference-paper

Improvement of the lossless compression of images with quasi-sparse histograms

European Signal Processing Conference

2002 | conference-paper

Preprocessing techniques for improving the lossless compression of images with quasi-sparse and locally sparse histograms

Proceedings - 2002 IEEE International Conference on Multimedia and Expo, ICME 2002

2002 | conference-paper

Why does histogram packing improve lossless compression rates?

IEEE Signal Processing Letters

2002 | journal-article

Adaptive context-based arithmetic coding of arbitrary contour maps

IEEE Signal Processing Letters

2001 | journal-article

On the impact of histogram sparseness on some lossless image compression techniques

IEEE International Conference on Image Processing

2001 | conference-paper

Region-based near-lossless image compression

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2001 | conference-paper

A JBIG-based approach to the encoding of contour maps

IEEE Transactions on Image Processing

2000 | journal-article

Constrained and unconstrained simplification of image partitions encoded with the method of transition points

IEEE International Conference on Image Processing

2000 | conference-paper

High quality region-based video coding

IEEE International Conference on Image Processing

2000 | conference-paper

Simplification of image partitions for region-based image coding

European Signal Processing Conference

2000 | conference-paper

Encoding of image partitions using a standard technique for lossless image compression

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

1999 | conference-paper

A method for encoding region boundaries based on transition points

Image and Vision Computing

1998 | journal-article

Asymptotic approximation power for neural networks

IEEE International Conference on Neural Networks - Conference Proceedings

1998 | conference-paper

Encoding of closed boundaries using transition points

IEEE International Conference on Image Processing

1998 | conference-paper

Improvement of region-based image coding by neural networks

IEEE International Conference on Neural Networks - Conference Proceedings

1998 | conference-paper

Contextual edge detection using a recurrent neural network

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

1997 | book

Example of tuned neural network based noise reduction filters for images

IEEE International Conference on Neural Networks - Conference Proceedings

1996 | conference-paper

Figures of merit for quality assessment of binary edge maps

IEEE International Conference on Image Processing

1996 | conference-paper

On the partition of binary edge maps as a first step for quantitative quality evaluation

IEEE International Conference on Image Processing

1996 | conference-paper

Edge detection filters based on artificial neural networks

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

1995 | book

Errorless restoration algorithms for band-limited images

Proceedings - International Conference on Image Processing, ICIP

1994 | conference-paper

Some results on edge enhancement with neural networks

Proceedings - International Conference on Image Processing, ICIP

1994 | conference-paper

Exact reconstruction algorithms for band-limited images

Proceedings of the Annual Conference on Engineering in Medicine and Biology

1993 | conference-paper

Image compression based on quadtree segmentation and artificial neural networks

Electronics Letters

1993 | journal-article

Modeling non-linear edge detectors using artificial neural networks

Proceedings of the Annual Conference on Engineering in Medicine and Biology

1993 | conference-paper

Adaptive ECG data compression based on multiple artificial neural networks

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

1992 | conference-paper

Quality-controlled image compression

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

1992 | conference-paper

A Machine Learning Method for Authentication of Human Ancient Mitochondrial DNA

2026 | book-chapter

ECOmpress: A Web Tool for Boosting Energy Efficiency Through Data Compression

2026 | book-chapter

GBRF: A Novel Framework for Encoding User-Preferences in Imbalanced Data Distributions via Genetic Optimization

2026 | book-chapter

Informed Decision Making Strategy for Resampling in Pain Assessment

2026 | book-chapter

Towards a New Categorization of Models for Multivariate Time Series Anomaly Detection

2026 | book-chapter

A Survey on the Development of Human-Centered Artificial Agents for Fighting Games

IEEE Transactions on Games

2025 | journal-article

JARVIS3: an efficient encoder for genomic data

Bioinformatics

2024 | journal-article

AltaiR: a C toolkit for alignment-free and temporal analysis of multi-FASTA data

GigaScience

2024 | journal-article

Concentration of inverted repeats along human DNA

Journal of Integrative Bioinformatics

2023 | journal-article

AlcoR: alignment-free simulation, mapping, and visualization of low-complexity regions in biological data

2023 | preprint

Genomic Regions with Atypical Concentration of Inverted Repeats

2023 | book-chapter

Pattern Recognition and Image Analysis

Springer International Publishing

2022 | edited-book

On the Impact of the Data Acquisition Protocol on ECG Biometric Identification

Sensors

2021 | journal-article

AC2: An Efficient Protein Sequence Compression Tool Using Artificial Neural Networks and Cache-Hash Models

Entropy

2021 | journal-article

Automatic analysis of artistic paintings using information-based measures

2021 | website

Statistical n-Best AFD-Based Sparse Representation for ECG Biometric Identification

IEEE Transactions on Instrumentation and Measurement

2021 | journal-article

Assessing Job Market Dynamics Using ELK Stack

19th International Conference on WWW/Internet

2020 | conference-paper

Multimodal Emotion Evaluation: A Physiological Model for Cost-Effective Emotion Classification

Sensors

2020 | journal-article

Competitive Segmentation Performance on Near-Lossless and Lossy Compressed Remote Sensing Images

IEEE Geoscience and Remote Sensing Letters

2020 | journal-article

An Information-Theoretical Method for Emotion Classification

IFMBE Proceedings

2020 | conference-paper

Detection and Characterization of Local Inverted Repeats Regularities

Advances in Intelligent Systems and Computing

2020 | book

GeCo2: An Optimized Tool for Lossless Compression and Analysis of DNA Sequences

Advances in Intelligent Systems and Computing

2020 | book

Visualization of Similar Primer and Adapter Sequences in Assembled Archaeal Genomes

Advances in Intelligent Systems and Computing

2020 | book

A Reference-Free Lossless Compression Algorithm for DNA Sequences Using a Competitive Prediction of Two Classes of Weighted Models

Entropy

2019 | journal-article

A DNA sequence corpus for compression benchmark

Advances in Intelligent Systems and Computing

2019 | book

A probabilistic method to find and visualize distinct regions in protein sequences

European Signal Processing Conference

2019 | conference-paper

AC: A Compression Tool for Amino Acid Sequences

Interdisciplinary Sciences: Computational Life Sciences

2019 | journal-article

An Analysis of Symmetric Words in Human DNA: Adjacent vs Non-adjacent Word Distances

Advances in Intelligent Systems and Computing

2019 | book

Compression of amino acid sequences

Advances in Intelligent Systems and Computing

2019 | book

Compression-Based Classification of ECG Using First-Order Derivatives

2019 | book-chapter

Cryfa: A secure encryption tool for genomic data

Bioinformatics

2019 | journal-article

Distribution of Distances Between Symmetric Words in the Human Genome: Analysis of Regular Peaks

Interdisciplinary Sciences: Computational Life Sciences

2019 | journal-article

NET-ASAR: A tool for DNA sequence search based on data compression

Advances in Intelligent Systems and Computing

2019 | book

Extended-alphabet finite-context models

Pattern Recognition Letters

2018 | journal-article

Metagenomic Composition Analysis of an Ancient Sequenced Polar Bear Jawbone from Svalbard

Genes

2018 | journal-article

FALCON-meta: a method to infer metagenomic composition of ancient DNA

2018 | other

An Application of Data Compression Models to Handwritten Digit Classification

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2018 | book

Biometric and emotion identification: An ECG compression based method

Frontiers in Psychology

2018 | journal-article

Comparing Reverse Complementary Genomic Words Based on Their Distance Distributions and Frequencies

Interdisciplinary Sciences: Computational Life Sciences

2018 | journal-article

Comparison of compression-based measures with application to the evolution of primate genomes

Entropy

2018 | journal-article

Metagenomic composition analysis of sedimentary ancient DNA from the Isle of Wight

European Signal Processing Conference

2018 | conference-paper

An approach to robot task learning and planning with loops

IEEE International Conference on Intelligent Robots and Systems

2017 | conference-paper

Cryfa: A tool to compact and encrypt FASTA files

Advances in Intelligent Systems and Computing

2017 | book

DNA word analysis based on the distribution of the distances between symmetric words

Scientific Reports

2017 | journal-article

Dissimilar symmetric word pairs in the human genome

Advances in Intelligent Systems and Computing

2017 | book

Impact of the acquisition time on ECG compression-based biometric identification systems

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

Learning and planning of robot tasks with loops

2017 IEEE International Conference on Autonomous Robot Systems and Competitions, ICARSC 2017

2017 | conference-paper

Learning robot tasks with loops from experiences to enhance robot adaptability

Pattern Recognition Letters

2017 | journal-article

On the approximation of the Kolmogorov complexity for DNA sequences

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

On the role of inverted repeats in DNA sequence similarity

Advances in Intelligent Systems and Computing

2017 | book

Substitutional tolerant markov models for relative compression of DNA sequences

Advances in Intelligent Systems and Computing

2017 | book

Visualization of distinct DNA regions of the modern human relatively to a neanderthal genome

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2017 | book

A survey on data compression methods for biological sequences

Information (Switzerland)

2016 | journal-article

Analysis-driven lossy compression of DNA microarray images

IEEE Transactions on Medical Imaging

2016 | journal-article

Authorship Attribution Using Relative Compression

Data Compression Conference Proceedings

2016 | conference-paper

Detection of exceptional genomic words: a comparison between species

22nd International Conference on Computational Statistics, COMPSTAT 2016

2016 | conference-abstract

Efficient Compression of Genomic Sequences

Data Compression Conference Proceedings

2016 | conference-paper

Experience-Based Planning Domains: an Integrated Learning and Deliberation Approach for Intelligent Robots: Robot Task Learning from Human Instructions

Journal of Intelligent and Robotic Systems: Theory and Applications

2016 | journal-article

Experience-based robot task Learning and planning with goal inference

Proceedings International Conference on Automated Planning and Scheduling, ICAPS

2016 | conference-paper

Gathering and conceptualizing plan-based robot activity experiences

Advances in Intelligent Systems and Computing

2016 | book

Progressive lossy-to-lossless compression of DNA microarray images

IEEE Signal Processing Letters

2016 | journal-article

An alignment-free method to find and visualise rearrangements between pairs of DNA sequences

Scientific Reports

2015 | journal-article

ECG biometric identification: A compression based approach

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

2015 | conference-paper

Mafco: A compression tool for MAF files

PLoS ONE

2015 | journal-article

Planning with activity schemata: Closing the loop in experience-based planning

Proceedings - 2015 IEEE International Conference on Autonomous Robot Systems and Competitions, ICARSC 2015

2015 | conference-paper

Three minimal sequences found in Ebola virus genomes and absent from human DNA

Bioinformatics

2015 | journal-article

A conditional compression distance that unveils insights of the genomic evolution

Data Compression Conference Proceedings

2014 | conference-paper

A method to detect repeated unknown patterns in an image

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

A new compressor for measuring distances among images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

Compression of microarray images using a binary tree decomposition

European Signal Processing Conference

2014 | conference-paper

Compression-based normal similarity measures for DNA sequences

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2014 | conference-paper

Exploring deep Markov models in genomic data compression using sequence pre-analysis

European Signal Processing Conference

2014 | conference-paper

Information profiles for DNA pattern discovery

Data Compression Conference Proceedings

2014 | conference-paper

Mfcompress: A compression tool for fasta and multi-fasta data

Bioinformatics

2014 | journal-article

On entropy-based data mining

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2014 | book

The natural scale of signals: Pulse duration and superoscillations

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2014 | conference-paper

XS: A FASTQ read simulator

BMC Research Notes

2014 | journal-article

A compression model for DNA multiple sequence alignment blocks

IEEE Transactions on Information Theory

2013 | journal-article

A genomic distance for assembly comparison based on compressed maximal exact matches

IEEE/ACM Transactions on Computational Biology and Bioinformatics

2013 | journal-article

An ontology-based multi-level robot architecture for learning from experiences

AAAI Spring Symposium - Technical Report

2013 | conference-paper

Bacterial DNA sequence compression models using artificial neural networks

Entropy

2013 | journal-article

Compressing resequencing data with GReEn

Methods in Molecular Biology

2013 | book

DNA sequences at a glance

PLoS ONE

2013 | journal-article

Inter-STOP symbol distances for the identification of coding regions.

Journal of integrative bioinformatics

2013 | journal-article

Segmentation of DNA into Coding and Noncoding Regions Based on Inter-STOP Symbols Distances

Advances in Intelligent Systems and Computing

2013 | book

The breakdown of the word symmetry in the human genome

Journal of Theoretical Biology

2013 | journal-article

The rank of random binary matrices and distributed storage applications

IEEE Communications Letters

2013 | journal-article

Compression of whole genome alignments using a mixture of finite-context models

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2012 | book

Computation of the normalized compression distance of DNA sequences using a mixture of finite-context models

BIOINFORMATICS 2012 - Proceedings of the International Conference on Bioinformatics Models, Methods and Algorithms

2012 | conference-paper

Exon: A web-based software toolkit for DNA sequence analysis

Advances in Intelligent and Soft Computing

2012 | book

Finite-context models for image compression

Computational Vision and Medical Image Processing, Proceedings of VipIMAGE 2011 - 3rd ECCOMAS Thematic Conference on Computational Vision and Medical Image Processing

2012 | conference-paper

GReEn: A tool for efficient compression of genome resequencing data

Nucleic Acids Research

2012 | journal-article

On the detection of unknown locally repeating patterns in images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2012 | book

A probabilistic image analysis problem and random linear equations

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

An efficient omnidirectional vision system for soccer robots: From calibration to object detection

Mechatronics

2011 | journal-article

Bacteria DNA sequence compression using a mixture of finite-context models

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

Complexity profiles of DNA sequences using finite-context models

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2011 | book

Compressing the human genome using exclusively Markov models

Advances in Intelligent and Soft Computing

2011 | book

DNA synthetic sequences generation using multiple competing Markov models

IEEE Workshop on Statistical Signal Processing Proceedings

2011 | conference-paper

Distances between dinucleotides in the human genome

Advances in Intelligent and Soft Computing

2011 | book

Finding unknown repeated patterns in images

European Signal Processing Conference

2011 | conference-paper

Genome analysis with distance to the nearest dissimilar nucleotide

Journal of Theoretical Biology

2011 | journal-article

Image similarity using the normalized compression distance based on finite context models

Proceedings - International Conference on Image Processing, ICIP

2011 | conference-paper

Inter-dinucleotide distances in the human genome: an analysis of the whole-genome and protein-coding distributions.

Journal of integrative bioinformatics

2011 | journal-article

Minimal absent words in four human genome assemblies

PLoS ONE

2011 | journal-article

Minimal absent words in prokaryotic and eukaryotic genomes

PLoS ONE

2011 | journal-article

On the representability of complete genomes by multiple competing finite-context (Markov) models

PLoS ONE

2011 | journal-article

Random block-angular matrices for distributed data storage

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2011 | conference-paper

Symbolic to numerical conversion of DNA sequences using finite-context models

European Signal Processing Conference

2011 | conference-paper

Exploring homology using the concept of three-state entropy vector

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2010 | book

Autonomous configuration of parameters in robotic digital cameras

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

DNA coding using finite-context models and arithmetic coding

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2009 | conference-paper

Genome analysis with inter-nucleotide distances

Bioinformatics

2009 | journal-article

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics): Preface

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

Lossless compression of microarray images using image-dependent finite-context models

IEEE Transactions on Medical Imaging

2009 | journal-article

On finding minimal absent words

BMC Bioinformatics

2009 | journal-article

Progressive lossless compression of medical images

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2009 | conference-paper

Variable order finite-context models in DNA sequence coding

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2009 | book

A bitplane based algorithm for lossless compression of DNA microarray images

European Signal Processing Conference

2008 | conference-paper

Inverted-repeats-aware finite-context models for DNA coding

European Signal Processing Conference

2008 | conference-paper

An omnidirectional vision system for soccer robots

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2007 | book

L-infinity progressive image compression

PCS 2007 - 26th Picture Coding Symposium

2007 | conference-paper

A bit-plane approach for lossless compression of color-quantized images

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2006 | conference-paper

A three-state model for DNA protein-coding regions

IEEE Transactions on Biomedical Engineering

2006 | journal-article

Enhancing the reactivity of the vision subsystem in autonomous mobile robots using real-time techniques

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2006 | book

Exploring three-base periodicity for DNA compression and modeling

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2006 | conference-paper

Lossless compression of microarray images

Proceedings - International Conference on Image Processing, ICIP

2006 | conference-paper

Lossy-to-lossless compression of images based on binary tree decomposition

Proceedings - International Conference on Image Processing, ICIP

2006 | conference-paper

On the relation between Memon's and the modified Zeng's palette reordering methods

Image and Vision Computing

2006 | journal-article

On the use of standards for microarray lossless image compression

IEEE Transactions on Biomedical Engineering

2006 | journal-article

A context adaptation model for the compression of images with a reduced number of colors

Proceedings - International Conference on Image Processing, ICIP

2005 | conference-paper

Lossless bit-plane compression of microarray images using 3D context models

Proceedings of the 5th IASTED International Conference on Visualization, Imaging, and Image Processing, VIIP 2005

2005 | conference-paper

A note on Zeng's technique for color reindexing of palette-based images

IEEE Signal Processing Letters

2004 | journal-article

A survey on palette reordering methods for improving the compression of color-indexed images

IEEE Transactions on Image Processing

2004 | journal-article

Evaluation of some reordering techniques for image VQ index compression

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2004 | book

Lossless compression of color-quantized images using block-based palette reordering

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2004 | book

Palette reordering under an exponential power distribution model of prediction residuals

Proceedings - International Conference on Image Processing, ICIP

2004 | conference-paper

Variable size block-based histogram packing for lossless coding of color-quantized images

Proceedings of the Fourth IASTED International Conference on Visualization, Imaging, and Image Processing

2004 | conference-paper

Block-based histogram packing of color-quantized images

Proceedings - IEEE International Conference on Multimedia and Expo

2003 | conference-paper

JPEG 2000 coding of color-quantized images

IEEE International Conference on Image Processing

2003 | conference-paper

On the efficiency of luminance-based palette reordering of color-quantized images

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

2003 | book

A comparison of methods for improving the lossless compression of images with sparse histograms

IEEE International Conference on Image Processing

2002 | conference-paper

An online preprocessing technique for improving the lossless compression of images with sparse histograms

IEEE Signal Processing Letters

2002 | journal-article

Histogram packing, total variation, and lossless image compression

European Signal Processing Conference

2002 | conference-paper

Improvement of the lossless compression of images with quasi-sparse histograms

European Signal Processing Conference

2002 | conference-paper

Preprocessing techniques for improving the lossless compression of images with quasi-sparse and locally sparse histograms

Proceedings - 2002 IEEE International Conference on Multimedia and Expo, ICME 2002

2002 | conference-paper

Why does histogram packing improve lossless compression rates?

IEEE Signal Processing Letters

2002 | journal-article

Adaptive context-based arithmetic coding of arbitrary contour maps

IEEE Signal Processing Letters

2001 | journal-article

On the impact of histogram sparseness on some lossless image compression techniques

IEEE International Conference on Image Processing

2001 | conference-paper

Region-based near-lossless image compression

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

2001 | conference-paper

A JBIG-based approach to the encoding of contour maps

IEEE Transactions on Image Processing

2000 | journal-article

Constrained and unconstrained simplification of image partitions encoded with the method of transition points

IEEE International Conference on Image Processing

2000 | conference-paper

High quality region-based video coding

IEEE International Conference on Image Processing

2000 | conference-paper

Simplification of image partitions for region-based image coding

European Signal Processing Conference

2000 | conference-paper

Encoding of image partitions using a standard technique for lossless image compression

ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings

1999 | conference-paper

A method for encoding region boundaries based on transition points

Image and Vision Computing

1998 | journal-article

Asymptotic approximation power for neural networks

IEEE International Conference on Neural Networks - Conference Proceedings

1998 | conference-paper

Encoding of closed boundaries using transition points

IEEE International Conference on Image Processing

1998 | conference-paper

Improvement of region-based image coding by neural networks

IEEE International Conference on Neural Networks - Conference Proceedings

1998 | conference-paper

Contextual edge detection using a recurrent neural network

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

1997 | book

Example of tuned neural network based noise reduction filters for images

IEEE International Conference on Neural Networks - Conference Proceedings

1996 | conference-paper

Figures of merit for quality assessment of binary edge maps

IEEE International Conference on Image Processing

1996 | conference-paper

On the partition of binary edge maps as a first step for quantitative quality evaluation

IEEE International Conference on Image Processing

1996 | conference-paper

Edge detection filters based on artificial neural networks

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)

1995 | book

Errorless restoration algorithms for band-limited images

Proceedings - International Conference on Image Processing, ICIP

1994 | conference-paper

Some results on edge enhancement with neural networks

Proceedings - International Conference on Image Processing, ICIP

1994 | conference-paper

Exact reconstruction algorithms for band-limited images

Proceedings of the Annual Conference on Engineering in Medicine and Biology

1993 | conference-paper

Image compression based on quadtree segmentation and artificial neural networks

Electronics Letters

1993 | journal-article

Modeling non-linear edge detectors using artificial neural networks

Proceedings of the Annual Conference on Engineering in Medicine and Biology

1993 | conference-paper

Adaptive ECG data compression based on multiple artificial neural networks

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

1992 | conference-paper

Quality-controlled image compression

Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS

1992 | conference-paper

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